mirror of
https://github.com/nqrduck/nqrduck-spectrometer.git
synced 2024-11-08 12:00:02 +00:00
Update to new external functions.
This commit is contained in:
jupfi
parent
d4ad66269c
commit
b7de6baa6b
1 changed files with 60 additions and 414 deletions
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@ -6,425 +6,22 @@ Todo:
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from __future__ import annotations
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import logging
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import numpy as np
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import sympy
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from decimal import Decimal
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from PyQt6.QtGui import QPixmap
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from nqrduck.contrib.mplwidget import MplWidget
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from nqrduck.helpers.signalprocessing import SignalProcessing as sp
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from numpy.core.multiarray import array as array
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from nqrduck.assets.icons import PulseParamters
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from nqrduck.helpers.functions import (
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Function,
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RectFunction,
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SincFunction,
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GaussianFunction,
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CustomFunction,
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)
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from .base_spectrometer_model import BaseSpectrometerModel
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logger = logging.getLogger(__name__)
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class Function:
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"""A function that can be used as a pulse parameter.
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This class is the base class for all functions that can be used as pulse parameters. Functions can be used for pulse shapes, for example.
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Args:
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expr (str | sympy.Expr): The expression of the function.
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Attributes:
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name (str): The name of the function.
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parameters (list): The parameters of the function.
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expr (sympy.Expr): The sympy expression of the function.
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resolution (Decimal): The resolution of the function in seconds.
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start_x (float): The x value where the evalution of the function starts.
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end_x (float): The x value where the evalution of the function ends.
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"""
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name: str
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parameters: list
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expression: str | sympy.Expr
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resolution: Decimal
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start_x: float
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end_x: float
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def __init__(self, expr) -> None:
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"""Initializes the function."""
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self.parameters = []
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self.expr = expr
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self.resolution = Decimal(1 / 30.72e6)
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self.start_x = -1
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self.end_x = 1
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def get_time_points(self, pulse_length: Decimal) -> np.ndarray:
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"""Returns the time domain points for the function with the given pulse length.
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Args:
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pulse_length (Decimal): The pulse length in seconds.
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Returns:
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np.ndarray: The time domain points.
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"""
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# Get the time domain points
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n = int(pulse_length / self.resolution)
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t = np.linspace(0, float(pulse_length), n)
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return t
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def evaluate(self, pulse_length: Decimal, resolution: Decimal = None) -> np.ndarray:
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"""Evaluates the function for the given pulse length.
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Args:
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pulse_length (Decimal): The pulse length in seconds.
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resolution (Decimal, optional): The resolution of the function in seconds. Defaults to None.
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Returns:
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np.ndarray: The evaluated function.
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"""
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if resolution is None:
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resolution = self.resolution
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n = int(pulse_length / resolution)
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t = np.linspace(self.start_x, self.end_x, n)
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x = sympy.symbols("x")
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found_variables = dict()
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# Create a dictionary of the parameters and their values
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for parameter in self.parameters:
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found_variables[parameter.symbol] = parameter.value
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final_expr = self.expr.subs(found_variables)
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# If the expression is a number (does not depend on x), return an array of that number
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if final_expr.is_number:
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return np.full(t.shape, float(final_expr))
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f = sympy.lambdify([x], final_expr, "numpy")
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return f(t)
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def get_tdx(self, pulse_length: float) -> np.ndarray:
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"""Returns the time domain points and the evaluated function for the given pulse length.
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Args:
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pulse_length (float): The pulse length in seconds.
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Returns:
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np.ndarray: The time domain points.
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"""
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n = int(pulse_length / self.resolution)
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t = np.linspace(self.start_x, self.end_x, n)
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return t
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def frequency_domain_plot(self, pulse_length: Decimal) -> MplWidget:
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"""Plots the frequency domain of the function for the given pulse length.
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Args:
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pulse_length (Decimal): The pulse length in seconds.
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Returns:
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MplWidget: The matplotlib widget containing the plot.
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"""
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mpl_widget = MplWidget()
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td = self.get_time_points(pulse_length)
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yd = self.evaluate(pulse_length)
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xdf, ydf = sp.fft(td, yd)
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mpl_widget.canvas.ax.plot(xdf, abs(ydf))
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mpl_widget.canvas.ax.set_xlabel("Frequency in Hz")
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mpl_widget.canvas.ax.set_ylabel("Magnitude")
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mpl_widget.canvas.ax.grid(True)
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return mpl_widget
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def time_domain_plot(self, pulse_length: Decimal) -> MplWidget:
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"""Plots the time domain of the function for the given pulse length.
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Args:
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pulse_length (Decimal): The pulse length in seconds.
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Returns:
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MplWidget: The matplotlib widget containing the plot.
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"""
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mpl_widget = MplWidget()
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td = self.get_time_points(pulse_length)
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mpl_widget.canvas.ax.plot(td, abs(self.evaluate(pulse_length)))
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mpl_widget.canvas.ax.set_xlabel("Time in s")
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mpl_widget.canvas.ax.set_ylabel("Magnitude")
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mpl_widget.canvas.ax.grid(True)
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return mpl_widget
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def get_pulse_amplitude(
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self, pulse_length: Decimal, resolution: Decimal = None
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) -> np.array:
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"""Returns the pulse amplitude in the time domain.
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Args:
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pulse_length (Decimal): The pulse length in seconds.
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resolution (Decimal, optional): The resolution of the function in seconds. Defaults to None.
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Returns:
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np.array: The pulse amplitude.
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"""
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return self.evaluate(pulse_length, resolution=resolution)
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def add_parameter(self, parameter: Function.Parameter) -> None:
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"""Adds a parameter to the function.
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Args:
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parameter (Function.Parameter): The parameter to add.
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"""
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self.parameters.append(parameter)
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def to_json(self) -> dict:
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"""Returns a json representation of the function.
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Returns:
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dict: The json representation of the function.
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"""
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return {
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"name": self.name,
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"parameters": [parameter.to_json() for parameter in self.parameters],
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"expression": str(self.expr),
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"resolution": self.resolution,
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"start_x": self.start_x,
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"end_x": self.end_x,
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}
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@classmethod
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def from_json(cls, data: dict) -> Function:
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"""Creates a function from a json representation.
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Args:
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data (dict): The json representation of the function.
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Returns:
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Function: The function.
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"""
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for subclass in cls.__subclasses__():
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if subclass.name == data["name"]:
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cls = subclass
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break
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obj = cls()
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obj.expr = data["expression"]
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obj.name = data["name"]
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obj.resolution = data["resolution"]
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obj.start_x = data["start_x"]
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obj.end_x = data["end_x"]
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obj.parameters = []
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for parameter in data["parameters"]:
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obj.add_parameter(Function.Parameter.from_json(parameter))
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return obj
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@property
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def expr(self):
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"""The sympy expression of the function."""
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return self._expr
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@expr.setter
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def expr(self, expr):
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if isinstance(expr, str):
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try:
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self._expr = sympy.sympify(expr)
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except ValueError:
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logger.error("Could not convert %s to a sympy expression", expr)
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raise SyntaxError("Could not convert %s to a sympy expression" % expr)
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elif isinstance(expr, sympy.Expr):
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self._expr = expr
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@property
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def resolution(self):
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"""The resolution of the function in seconds."""
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return self._resolution
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@resolution.setter
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def resolution(self, resolution):
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try:
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self._resolution = Decimal(resolution)
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except ValueError:
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logger.error("Could not convert %s to a decimal", resolution)
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raise SyntaxError("Could not convert %s to a decimal" % resolution)
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@property
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def start_x(self):
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"""The x value where the evalution of the function starts."""
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return self._start_x
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@start_x.setter
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def start_x(self, start_x):
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try:
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self._start_x = float(start_x)
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except ValueError:
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logger.error("Could not convert %s to a float", start_x)
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raise SyntaxError("Could not convert %s to a float" % start_x)
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@property
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def end_x(self):
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"""The x value where the evalution of the function ends."""
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return self._end_x
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@end_x.setter
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def end_x(self, end_x):
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try:
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self._end_x = float(end_x)
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except ValueError:
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logger.error("Could not convert %s to a float", end_x)
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raise SyntaxError("Could not convert %s to a float" % end_x)
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def get_pixmap(self):
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"""This is the default pixmap for every function. If one wants to have a custom pixmap, this method has to be overwritten.
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Returns:
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QPixmap : The default pixmap for every function
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"""
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pixmap = PulseParamters.TXCustom()
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return pixmap
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class Parameter:
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"""A parameter of a function.
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This can be for example the standard deviation of a Gaussian function.
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Args:
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name (str): The name of the parameter.
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symbol (str): The symbol of the parameter.
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value (float): The value of the parameter.
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Attributes:
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name (str): The name of the parameter.
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symbol (str): The symbol of the parameter.
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value (float): The value of the parameter.
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default (float): The default value of the parameter.
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"""
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def __init__(self, name: str, symbol: str, value: float) -> None:
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"""Initializes the parameter."""
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self.name = name
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self.symbol = symbol
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self.value = value
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self.default = value
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def set_value(self, value: float) -> None:
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"""Sets the value of the parameter.
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Args:
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value (float): The new value of the parameter.
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"""
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self.value = value
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logger.debug("Parameter %s set to %s", self.name, self.value)
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def to_json(self) -> dict:
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"""Returns a json representation of the parameter.
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Returns:
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dict: The json representation of the parameter.
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"""
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return {
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"name": self.name,
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"symbol": self.symbol,
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"value": self.value,
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"default": self.default,
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}
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@classmethod
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def from_json(cls, data):
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"""Creates a parameter from a json representation.
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Args:
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data (dict): The json representation of the parameter.
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Returns:
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Function.Parameter: The parameter.
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"""
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obj = cls(data["name"], data["symbol"], data["value"])
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obj.default = data["default"]
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return obj
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class RectFunction(Function):
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"""The rectangular function."""
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name = "Rectangular"
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def __init__(self) -> None:
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"""Initializes the RecFunction."""
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expr = sympy.sympify("1")
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super().__init__(expr)
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def get_pixmap(self) -> QPixmap:
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"""Returns the pixmap of the rectangular function.
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Returns:
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QPixmap: The pixmap of the rectangular function.
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"""
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pixmap = PulseParamters.TXRect()
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return pixmap
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class SincFunction(Function):
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"""The sinc function.
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The sinc function is defined as sin(x * l) / (x * l).
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The parameter is the scale factor l.
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"""
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name = "Sinc"
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def __init__(self) -> None:
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"""Initializes the SincFunction."""
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expr = sympy.sympify("sin(x * l)/ (x * l)")
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super().__init__(expr)
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self.add_parameter(Function.Parameter("Scale Factor", "l", 2))
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self.start_x = -np.pi
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self.end_x = np.pi
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def get_pixmap(self):
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"""Returns the pixmap of the sinc function.
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Returns:
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QPixmap: The pixmap of the sinc function.
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"""
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pixmap = PulseParamters.TXSinc()
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return pixmap
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class GaussianFunction(Function):
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"""The Gaussian function.
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The Gaussian function is defined as exp(-0.5 * ((x - mu) / sigma)**2).
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The parameters are the mean and the standard deviation.
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"""
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name = "Gaussian"
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def __init__(self) -> None:
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"""Initializes the GaussianFunction."""
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expr = sympy.sympify("exp(-0.5 * ((x - mu) / sigma)**2)")
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super().__init__(expr)
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self.add_parameter(Function.Parameter("Mean", "mu", 0))
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self.add_parameter(Function.Parameter("Standard Deviation", "sigma", 1))
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self.start_x = -np.pi
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self.end_x = np.pi
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def get_pixmap(self):
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"""Returns the QPixmap of the Gaussian function.
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Returns:
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QPixmap: The QPixmap of the Gaussian function.
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"""
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pixmap = PulseParamters.TXGauss()
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return pixmap
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# class TriangleFunction(Function):
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# def __init__(self) -> None:
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# expr = sympy.sympify("triang(x)")
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# super().__init__(lambda x: triang(x))
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class CustomFunction(Function):
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"""A custom function."""
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name = "Custom"
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def __init__(self) -> None:
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"""Initializes the Custom Function."""
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expr = sympy.sympify(" 2 * x**2 + 3 * x + 1")
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super().__init__(expr)
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class Option:
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"""Defines options for the pulse parameters which can then be set accordingly.
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@ -574,6 +171,50 @@ class FunctionOption(Option):
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return self.value.get_pixmap()
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class TXRectFunction(RectFunction):
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def __init__(self) -> None:
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super().__init__()
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self.name = "TX Rectangular Pulse"
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def get_pixmap(self):
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"""Returns the pixmaps of the function."""
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return PulseParamters.TXRect()
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class TXSincFunction(SincFunction):
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def __init__(self) -> None:
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super().__init__()
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self.name = "TX Sinc Pulse"
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def get_pixmap(self):
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"""Returns the pixmaps of the function."""
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return PulseParamters.TXSinc()
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class TXGaussianFunction(GaussianFunction):
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def __init__(self) -> None:
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super().__init__()
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self.name = "TX Gaussian Pulse"
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def get_pixmap(self):
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"""Returns the pixmaps of the function."""
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return PulseParamters.TXGauss()
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class TXCustomFunction(CustomFunction):
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def __init__(self) -> None:
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super().__init__()
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self.name = "TX Custom Pulse"
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def get_pixmap(self):
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"""Returns the pixmaps of the function."""
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return PulseParamters.TXCustom()
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class TXPulse(BaseSpectrometerModel.PulseParameter):
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"""Basic TX Pulse Parameter. It includes options for the relative amplitude, the phase and the pulse shape.
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@ -601,7 +242,12 @@ class TXPulse(BaseSpectrometerModel.PulseParameter):
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self.add_option(
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FunctionOption(
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self.TX_PULSE_SHAPE,
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[RectFunction(), SincFunction(), GaussianFunction(), CustomFunction()],
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[
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TXRectFunction(),
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TXSincFunction(),
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TXGaussianFunction(),
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TXCustomFunction(),
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],
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),
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)
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