mirror of
https://github.com/nqrduck/nqrduck-spectrometer-simulator.git
synced 2024-12-21 07:00:25 +00:00
Updated settings with more information and new visualization options.
This commit is contained in:
jupfi
parent
705a129019
commit
d144821def
1 changed files with 58 additions and 23 deletions
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@ -70,6 +70,8 @@ class SimulatorModel(BaseSpectrometerModel):
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self.NUMBER_POINTS,
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8192,
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"Number of points used for the simulation. This influences the dwell time in combination with the total event simulation given by the pulse sequence.",
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min_value=0,
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spin_box=(True, False),
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)
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self.add_setting(
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number_of_points_setting,
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@ -90,6 +92,8 @@ class SimulatorModel(BaseSpectrometerModel):
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self.INITIAL_MAGNETIZATION,
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1,
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"Initial magnetization",
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min_value=0,
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spin_box=(True, False),
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)
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self.add_setting(initial_magnetization_setting, self.SIMULATION)
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@ -98,13 +102,14 @@ class SimulatorModel(BaseSpectrometerModel):
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self.GRADIENT,
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1,
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"Gradient",
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spin_box=(True, False),
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)
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self.add_setting(gradient_setting, self.SIMULATION)
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noise_setting = FloatSetting(
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self.NOISE,
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2,
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"Noise",
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"Adds a specified level of random noise to the simulation to mimic real-world signal variations.",
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min_value=0,
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max_value=100,
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spin_box=(True, False),
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@ -115,42 +120,48 @@ class SimulatorModel(BaseSpectrometerModel):
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coil_length_setting = FloatSetting(
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self.LENGTH_COIL,
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30e-3,
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"Length coil",
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"The length of the sample coil within the hardware setup.",
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min_value=1e-3,
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)
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self.add_setting(coil_length_setting, self.HARDWARE)
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coil_diameter_setting = FloatSetting(
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self.DIAMETER_COIL,
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8e-3,
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"Diameter coil",
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"The diameter of the sample coil.",
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min_value=1e-3,
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)
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self.add_setting(coil_diameter_setting, self.HARDWARE)
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number_turns_setting = FloatSetting(
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self.NUMBER_TURNS,
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8,
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"Number turns",
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"The total number of turns of the sample coil.",
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min_value=1,
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)
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self.add_setting(number_turns_setting, self.HARDWARE)
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q_factor_transmit_setting = FloatSetting(
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self.Q_FACTOR_TRANSMIT,
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80,
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"Q factor Transmit",
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"The quality factor of the transmit path, which has an effect on the field strength for excitation.",
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min_value=1,
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)
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self.add_setting(q_factor_transmit_setting, self.HARDWARE)
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q_factor_receive_setting = FloatSetting(
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self.Q_FACTOR_RECEIVE,
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80,
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"Q factor Receive",
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"The quality factor of the receive path, which has an effect on the final SNR.",
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min_value=1,
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)
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self.add_setting(q_factor_receive_setting, self.HARDWARE)
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power_amplifier_power_setting = FloatSetting(
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self.POWER_AMPLIFIER_POWER,
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110,
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"Power amplifier power",
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"The power output capability of the power amplifier, determines the strength of pulses that can be generated.",
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min_value=0.1,
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)
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self.add_setting(
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power_amplifier_power_setting, self.HARDWARE
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@ -159,7 +170,8 @@ class SimulatorModel(BaseSpectrometerModel):
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gain_setting = FloatSetting(
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self.GAIN,
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6000,
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"Gain of the complete measurement chain",
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"The amplification factor of the receiver chain, impacting the final measured signal amplitude.",
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min_value=0.1,
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)
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self.add_setting(
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gain_setting, self.HARDWARE
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@ -168,7 +180,7 @@ class SimulatorModel(BaseSpectrometerModel):
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temperature_setting = FloatSetting(
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self.TEMPERATURE,
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300,
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"Temperature",
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"The absolute temperature during the experiment. This influences the SNR of the measurement.",
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min_value=0.1,
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max_value=400,
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spin_box=(True, True),
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@ -178,14 +190,20 @@ class SimulatorModel(BaseSpectrometerModel):
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loss_tx_setting = FloatSetting(
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self.LOSS_TX,
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25,
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"Loss TX in dB",
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"The signal loss occurring in the transmission path, affecting the effective RF pulse power.",
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min_value=0.1,
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max_value=60,
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spin_box=(True, True),
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)
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self.add_setting(loss_tx_setting, self.EXPERIMENTAL_Setup)
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loss_rx_setting = FloatSetting(
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self.LOSS_RX,
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25,
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"Loss RX in dB",
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"The signal loss in the reception path, which can reduce the signal that is ultimately detected.",
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min_value=0.1,
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max_value=60,
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spin_box=(True, True),
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)
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self.add_setting(loss_rx_setting, self.EXPERIMENTAL_Setup)
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@ -203,28 +221,31 @@ class SimulatorModel(BaseSpectrometerModel):
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sample_name_setting = StringSetting(
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self.NAME,
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"BiPh3",
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"Name",
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"The name of the sample.",
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)
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self.add_setting(sample_name_setting, self.SAMPLE)
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density_setting = FloatSetting(
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self.DENSITY,
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1.585e6,
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"Density",
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"The density of the sample. This is used to calculate the number of spins in the sample volume.",
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min_value=0.1,
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)
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self.add_setting(density_setting, self.SAMPLE)
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molar_mass_setting = FloatSetting(
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self.MOLAR_MASS,
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440.3,
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"Molar mass",
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"The molar mass of the sample. This is used to calculate the number of spins in the sample volume.",
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min_value=0.1,
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)
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self.add_setting(molar_mass_setting, self.SAMPLE)
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resonant_frequency_setting = FloatSetting(
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self.RESONANT_FREQUENCY,
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83.56e6,
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"Resonant frequency",
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"The resonant frequency of the observed transition.",
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min_value=1e5,
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)
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self.add_setting(
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resonant_frequency_setting, self.SAMPLE
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@ -233,56 +254,70 @@ class SimulatorModel(BaseSpectrometerModel):
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gamma_setting = FloatSetting(
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self.GAMMA,
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4.342e7,
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"Gamma",
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"The gyromagnetic ratio of the sample’s nuclei.",
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min_value=0,
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)
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self.add_setting(gamma_setting, self.SAMPLE)
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# This could be updated to a selection setting
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nuclear_spin_setting = FloatSetting(
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self.NUCLEAR_SPIN,
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9 / 2,
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"Nuclear spin",
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"The nuclear spin of the sample’s nuclei.",
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min_value=0,
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)
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self.add_setting(nuclear_spin_setting, self.SAMPLE)
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spin_factor_setting = FloatSetting(
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self.SPIN_FACTOR,
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2,
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"Spin factor",
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"The spin factor represents the scaling coefficient for observable nuclear spin transitions along the x-axis, derived from the Pauli I x 0 -matrix elements.",
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min_value=0,
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)
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self.add_setting(spin_factor_setting, self.SAMPLE)
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powder_factor_setting = FloatSetting(
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self.POWDER_FACTOR,
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0.75,
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"Powder factor",
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"A factor representing the crystallinity of the solid sample. A value of 0.75 corresponds to a powder sample.",
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min_value=0,
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max_value=1,
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spin_box=(True, False),
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)
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self.add_setting(powder_factor_setting, self.SAMPLE)
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filling_factor_setting = FloatSetting(
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self.FILLING_FACTOR,
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0.7,
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"Filling factor",
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"The ratio of the sample volume that occupies the coil’s sensitive volume.",
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min_value=0,
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max_value=1,
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spin_box=(True, False),
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)
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self.add_setting(filling_factor_setting, self.SAMPLE)
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t1_setting = FloatSetting(
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self.T1,
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83.5e-5,
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"T1",
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"The longitudinal or spin-lattice relaxation time of the sample, influencing signal recovery between pulses.",
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min_value=1e-6,
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)
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self.add_setting(t1_setting, self.SAMPLE)
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t2_setting = FloatSetting(
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self.T2,
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396e-6,
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"T2",
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"The transverse or spin-spin relaxation time, determining the rate at which spins dephase and the signal decays in the xy plane",
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min_value=1e-6,
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)
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self.add_setting(t2_setting, self.SAMPLE)
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t2_star_setting = FloatSetting(
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self.T2_STAR,
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50e-6,
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"T2*",
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"The effective transverse relaxation time, incorporating effects of EFG inhomogeneities and other dephasing factors.",
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min_value=1e-6,
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)
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self.add_setting(t2_star_setting, self.SAMPLE)
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